Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CCL13Q99616 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL13Q99616 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
CCL13Q99616 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL13Q99616 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCL13Q99616 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.22□□□□□ -0.13
CCL13Q99616 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCL13Q99616 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.22□□□□□ -0.13
CCL13Q99616 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 SLC25A1P1-201ENST00000528351 927 ntBASIC14.22□□□□□ -0.13
CCL13Q99616 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.22□□□□□ -0.13
CCL13Q99616 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CCL13Q99616 Z83851.2-201ENST00000609564 659 ntBASIC14.22□□□□□ -0.13
CCL13Q99616 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.22□□□□□ -0.13
CCL13Q99616 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCL13Q99616 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.22□□□□□ -0.13
CCL13Q99616 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL13Q99616 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL13Q99616 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCL13Q99616 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
CCL13Q99616 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL13Q99616 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.21□□□□□ -0.13
CCL13Q99616 SLC25A6P2-201ENST00000497974 877 ntBASIC14.21□□□□□ -0.13
CCL13Q99616 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL13Q99616 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL13Q99616 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL13Q99616 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL13Q99616 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL13Q99616 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
CCL13Q99616 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL13Q99616 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.21□□□□□ -0.14
CCL13Q99616 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL13Q99616 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.21□□□□□ -0.14
CCL13Q99616 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms