Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 MIR3180-1-201ENST00000580374 94 ntBASIC15.28■□□□□ 0.04
PTP4A1Q93096 MIR3180-3-201ENST00000584616 94 ntBASIC15.28■□□□□ 0.04
PTP4A1Q93096 NPAP1P7-201ENST00000613027 823 ntBASIC15.28■□□□□ 0.04
PTP4A1Q93096 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A1Q93096 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A1Q93096 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.27■□□□□ 0.04
PTP4A1Q93096 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 LINC00265-3P-201ENST00000447588 903 ntBASIC15.27■□□□□ 0.04
PTP4A1Q93096 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 TOB2P1-201ENST00000469761 992 ntBASIC15.27■□□□□ 0.04
PTP4A1Q93096 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A1Q93096 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.27■□□□□ 0.04
PTP4A1Q93096 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 AC148477.5-201ENST00000625164 1645 ntBASIC15.27■□□□□ 0.03
PTP4A1Q93096 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A1Q93096 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.27■□□□□ 0.03
PTP4A1Q93096 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 AL513523.2-202ENST00000427283 2040 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms