Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COMMD1Q8N668 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.17□□□□□ -0.14
COMMD1Q8N668 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 AC005915.1-201ENST00000624912 2018 ntBASIC14.16□□□□□ -0.14
COMMD1Q8N668 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 TOB2P1-201ENST00000469761 992 ntBASIC14.16□□□□□ -0.14
COMMD1Q8N668 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.16□□□□□ -0.14
COMMD1Q8N668 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COMMD1Q8N668 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.16□□□□□ -0.14
COMMD1Q8N668 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 FLJ16779-201ENST00000612722 7638 ntBASIC14.15□□□□□ -0.14
COMMD1Q8N668 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 AL450487.1-201ENST00000426799 995 ntBASIC14.15□□□□□ -0.14
COMMD1Q8N668 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 AP000867.3-201ENST00000524675 377 ntBASIC14.15□□□□□ -0.14
COMMD1Q8N668 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 AL121772.3-201ENST00000610840 674 ntBASIC14.15□□□□□ -0.14
COMMD1Q8N668 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.15□□□□□ -0.14
COMMD1Q8N668 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD1Q8N668 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms