Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 KRT18P31-201ENST00000506277 1292 ntBASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 AC005332.3-201ENST00000589904 676 ntBASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 TCAF2P1-201ENST00000291129 2421 ntBASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AC046185.3-201ENST00000623228 1824 ntBASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AC099336.1-202ENST00000602961 463 ntBASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXR1Q6PIV2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms