Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 DOC2GP-204ENST00000639052 2548 ntBASIC17.6■□□□□ 0.41
LRRC38Q5VT99 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LRRC38Q5VT99 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 ME2P1-201ENST00000426028 1970 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 SNX33P1-201ENST00000592116 1762 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC021087.4-201ENST00000563761 564 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC091167.2-201ENST00000579581 588 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC006557.2-201ENST00000592985 1240 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 AC107918.4-202ENST00000641623 219 ntBASIC17.59■□□□□ 0.41
LRRC38Q5VT99 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRRC38Q5VT99 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LRRC38Q5VT99 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 AF238378.1-201ENST00000526806 358 ntBASIC17.58■□□□□ 0.4
LRRC38Q5VT99 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms