Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO1Q2MKA7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 RPS2P28-201ENST00000314255 741 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 AL031284.1-201ENST00000419297 478 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 HLA-J-202ENST00000469281 1241 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 MIR7706-201ENST00000613747 67 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 AL773604.1-201ENST00000617417 272 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 TNRC18P3-201ENST00000441896 2691 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 AL662844.4-201ENST00000606367 2838 ntBASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO1Q2MKA7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 AC131009.4-201ENST00000624048 1740 ntBASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 AL512652.2-201ENST00000625156 1716 ntBASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.64□□□□□ -0.07
RSPO1Q2MKA7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms