Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCR4P61073 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCR4P61073 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CXCR4P61073 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 AL596087.1-201ENST00000400979 1969 ntBASIC15.51■□□□□ 0.07
CXCR4P61073 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CXCR4P61073 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCR4P61073 FER1L4-210ENST00000615531 5998 ntBASIC15.5■□□□□ 0.07
CXCR4P61073 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 AC010460.3-201ENST00000511359 1579 ntBASIC15.5■□□□□ 0.07
CXCR4P61073 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TSPY26P-202ENST00000565928 3884 ntBASIC15.5■□□□□ 0.07
CXCR4P61073 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CXCR4P61073 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCR4P61073 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 AC092597.1-201ENST00000487352 616 ntBASIC15.5■□□□□ 0.07
CXCR4P61073 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.5■□□□□ 0.07
CXCR4P61073 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCR4P61073 AC109462.3-201ENST00000573934 613 ntBASIC15.5■□□□□ 0.07
CXCR4P61073 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.5■□□□□ 0.07
CXCR4P61073 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CXCR4P61073 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CXCR4P61073 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CXCR4P61073 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCR4P61073 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CXCR4P61073 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCR4P61073 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CXCR4P61073 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.49■□□□□ 0.07
CXCR4P61073 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CXCR4P61073 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.49■□□□□ 0.07
CXCR4P61073 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
CXCR4P61073 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.49■□□□□ 0.07
CXCR4P61073 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CXCR4P61073 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 AC006058.4-201ENST00000624016 1670 ntBASIC15.49■□□□□ 0.07
CXCR4P61073 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CXCR4P61073 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CXCR4P61073 AC087499.1-201ENST00000418141 1075 ntBASIC15.49■□□□□ 0.07
CXCR4P61073 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CXCR4P61073 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.49■□□□□ 0.07
CXCR4P61073 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CXCR4P61073 GPR32P1-201ENST00000601788 811 ntBASIC15.49■□□□□ 0.07
CXCR4P61073 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.49■□□□□ 0.07
CXCR4P61073 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.49■□□□□ 0.07
CXCR4P61073 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms