Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHRNA5P30532 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNA5P30532 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHRNA5P30532 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNA5P30532 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
CHRNA5P30532 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.6■□□□□ 0.89
CHRNA5P30532 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA5P30532 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA5P30532 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHRNA5P30532 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SLC7A15P-201ENST00000424028 1363 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.59■□□□□ 0.89
CHRNA5P30532 AC073439.1-201ENST00000624121 1774 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 AC090164.3-201ENST00000610780 2143 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA5P30532 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNA5P30532 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA5P30532 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 FAM86MP-201ENST00000340703 885 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHRNA5P30532 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA5P30532 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA5P30532 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA5P30532 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 RN7SL618P-201ENST00000477850 296 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.59■□□□□ 0.89
CHRNA5P30532 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SNX29P1-201ENST00000548357 1007 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA5P30532 MIR4525-201ENST00000580000 75 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.59■□□□□ 0.89
CHRNA5P30532 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA5P30532 AL355312.1-201ENST00000407115 2176 ntBASIC20.59■□□□□ 0.89
CHRNA5P30532 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA5P30532 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA5P30532 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 AC104581.1-202ENST00000635932 2618 ntBASIC20.58■□□□□ 0.89
CHRNA5P30532 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CHRNA5P30532 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNA5P30532 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA5P30532 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNA5P30532 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHRNA5P30532 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA5P30532 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA5P30532 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA5P30532 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHRNA5P30532 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CHRNA5P30532 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CHRNA5P30532 CTBP2P3-201ENST00000585629 1255 ntBASIC20.58■□□□□ 0.89
CHRNA5P30532 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHRNA5P30532 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.58■□□□□ 0.88
CHRNA5P30532 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.58■□□□□ 0.88
CHRNA5P30532 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA5P30532 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CHRNA5P30532 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
CHRNA5P30532 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA5P30532 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CHRNA5P30532 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA5P30532 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA5P30532 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA5P30532 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA5P30532 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms