Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM228BP0C875 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FAM228BP0C875 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
FAM228BP0C875 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FAM228BP0C875 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
FAM228BP0C875 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FAM228BP0C875 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 PRYP5-201ENST00000451909 266 ntBASIC18.11■□□□□ 0.49
FAM228BP0C875 AC132008.2-207ENST00000454517 770 ntBASIC18.11■□□□□ 0.49
FAM228BP0C875 BX005266.1-201ENST00000473402 457 ntBASIC18.11■□□□□ 0.49
FAM228BP0C875 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.11■□□□□ 0.49
FAM228BP0C875 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.11■□□□□ 0.49
FAM228BP0C875 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM228BP0C875 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM228BP0C875 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM228BP0C875 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FAM228BP0C875 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 AC006538.1-201ENST00000567905 1585 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.1■□□□□ 0.49
FAM228BP0C875 TERC-201ENST00000602385 541 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 AC138894.3-201ENST00000603787 634 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 AC064862.7-201ENST00000604520 867 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM228BP0C875 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.1■□□□□ 0.49
FAM228BP0C875 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FAM228BP0C875 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM228BP0C875 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
FAM228BP0C875 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FAM228BP0C875 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FAM228BP0C875 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FAM228BP0C875 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM228BP0C875 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM228BP0C875 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM228BP0C875 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM228BP0C875 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.09■□□□□ 0.49
FAM228BP0C875 KRT16P4-201ENST00000453883 522 ntBASIC18.09■□□□□ 0.49
FAM228BP0C875 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FAM228BP0C875 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.09■□□□□ 0.49
FAM228BP0C875 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.09■□□□□ 0.49
FAM228BP0C875 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.09■□□□□ 0.49
FAM228BP0C875 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms