Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.99■□□□□ 0.63
GGPS1O95749 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 AL627223.1-201ENST00000416693 442 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 HCG4-201ENST00000418983 998 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GGPS1O95749 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.99■□□□□ 0.63
GGPS1O95749 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.99■□□□□ 0.63
GGPS1O95749 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
GGPS1O95749 DUX4L17-201ENST00000557360 1267 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 AL135744.1-201ENST00000565098 629 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 RARRES2P8-201ENST00000566335 367 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
GGPS1O95749 AL009183.1-201ENST00000603760 355 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.99■□□□□ 0.63
GGPS1O95749 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 FRMD8P1-201ENST00000440433 1524 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.99■□□□□ 0.63
GGPS1O95749 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.98■□□□□ 0.63
GGPS1O95749 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.98■□□□□ 0.63
GGPS1O95749 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GGPS1O95749 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.98■□□□□ 0.63
GGPS1O95749 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
GGPS1O95749 RN7SL589P-201ENST00000481268 310 ntBASIC18.98■□□□□ 0.63
GGPS1O95749 HLA-J-203ENST00000494367 1087 ntBASIC18.98■□□□□ 0.63
GGPS1O95749 AC079140.1-201ENST00000508039 487 ntBASIC18.98■□□□□ 0.63
GGPS1O95749 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.98■□□□□ 0.63
GGPS1O95749 AC109322.1-201ENST00000524499 1264 ntBASIC18.98■□□□□ 0.63
GGPS1O95749 AC091167.2-201ENST00000579581 588 ntBASIC18.98■□□□□ 0.63
GGPS1O95749 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.98■□□□□ 0.63
GGPS1O95749 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
GGPS1O95749 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GGPS1O95749 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GGPS1O95749 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
GGPS1O95749 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 AC005237.2-201ENST00000434368 219 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 AL592309.1-201ENST00000443127 649 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.97■□□□□ 0.63
GGPS1O95749 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 AC243562.1-201ENST00000560672 389 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.97■□□□□ 0.63
GGPS1O95749 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 AL161645.1-201ENST00000622716 1255 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 LINC00628-201ENST00000628516 1289 ntBASIC18.97■□□□□ 0.63
GGPS1O95749 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
GGPS1O95749 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GGPS1O95749 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GGPS1O95749 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GGPS1O95749 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GGPS1O95749 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GGPS1O95749 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GGPS1O95749 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.96■□□□□ 0.63
GGPS1O95749 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
GGPS1O95749 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GGPS1O95749 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GGPS1O95749 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.96■□□□□ 0.63
GGPS1O95749 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms