Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC022145.2-201ENST00000598203 171 ntBASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL031055.1-201ENST00000606362 631 ntBASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SLC22A20-204ENST00000530038 1673 ntBASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LINC00896-202ENST00000609602 2128 ntBASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL133373.2-201ENST00000623187 2828 ntBASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC027612.4-201ENST00000605371 583 ntBASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RNU1-129P-201ENST00000384064 167 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TFAMP1-201ENST00000412727 736 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TSEN15P1-201ENST00000423257 515 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MIR3909-201ENST00000579518 119 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 U1.21-201ENST00000580816 167 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.93■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms