Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 KRT8P10-201ENST00000450021 1447 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AC063926.3-201ENST00000624734 5658 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 MIR1224-201ENST00000408193 85 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 PCED1CP-201ENST00000419887 785 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 KRT8P26-201ENST00000534154 1276 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AC124864.1-201ENST00000623408 392 ntBASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
THUMPD3Q9BV44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 AC125634.1-201ENST00000438758 1403 ntBASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ARMC10P1-201ENST00000313754 855 ntBASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 BX276092.5-203ENST00000456199 560 ntBASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 AC010331.1-201ENST00000611423 582 ntBASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THUMPD3Q9BV44 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD3Q9BV44 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms