Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 AL645728.1-201ENST00000366221 2101 ntBASIC17.98■□□□□ 0.47
TRIM11Q96F44 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 HLA-J-202ENST00000469281 1241 ntBASIC17.98■□□□□ 0.47
TRIM11Q96F44 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 AC064862.7-201ENST00000604520 867 ntBASIC17.98■□□□□ 0.47
TRIM11Q96F44 AC008608.2-201ENST00000606089 416 ntBASIC17.98■□□□□ 0.47
TRIM11Q96F44 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM11Q96F44 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM11Q96F44 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM11Q96F44 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 HLA-A-202ENST00000376806 1854 ntBASIC17.97■□□□□ 0.47
TRIM11Q96F44 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM11Q96F44 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms