Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF31Q96EP0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF31Q96EP0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 AL355312.1-201ENST00000407115 2176 ntBASIC16.44■□□□□ 0.22
RNF31Q96EP0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.44■□□□□ 0.22
RNF31Q96EP0 AL135999.2-201ENST00000622438 1686 ntBASIC16.44■□□□□ 0.22
RNF31Q96EP0 NFIC-211ENST00000641145 8399 ntBASIC16.44■□□□□ 0.22
RNF31Q96EP0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF31Q96EP0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF31Q96EP0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AC046185.3-201ENST00000623228 1824 ntBASIC16.43■□□□□ 0.22
RNF31Q96EP0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 MRPL20P1-201ENST00000400819 433 ntBASIC16.43■□□□□ 0.22
RNF31Q96EP0 PMS2P2-201ENST00000425039 1128 ntBASIC16.43■□□□□ 0.22
RNF31Q96EP0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 MTDHP5-201ENST00000598980 586 ntBASIC16.43■□□□□ 0.22
RNF31Q96EP0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AC046158.3-201ENST00000624947 2558 ntBASIC16.43■□□□□ 0.22
RNF31Q96EP0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF31Q96EP0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF31Q96EP0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF31Q96EP0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF31Q96EP0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms