Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.27■□□□□ 0.83
TNPO1Q92973 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.27■□□□□ 0.83
TNPO1Q92973 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.27■□□□□ 0.83
TNPO1Q92973 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.26■□□□□ 0.83
TNPO1Q92973 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TNPO1Q92973 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 IGHV3-47-201ENST00000425060 335 ntBASIC20.26■□□□□ 0.83
TNPO1Q92973 KRT16P4-201ENST00000453883 522 ntBASIC20.26■□□□□ 0.83
TNPO1Q92973 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.26■□□□□ 0.83
TNPO1Q92973 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.26■□□□□ 0.83
TNPO1Q92973 AC099336.1-202ENST00000602961 463 ntBASIC20.26■□□□□ 0.83
TNPO1Q92973 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TNPO1Q92973 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TNPO1Q92973 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNPO1Q92973 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.25■□□□□ 0.83
TNPO1Q92973 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.25■□□□□ 0.83
TNPO1Q92973 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNPO1Q92973 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.25■□□□□ 0.83
TNPO1Q92973 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
TNPO1Q92973 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 MINOS1P3-201ENST00000457048 203 ntBASIC20.25■□□□□ 0.83
TNPO1Q92973 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.25■□□□□ 0.83
TNPO1Q92973 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.25■□□□□ 0.83
TNPO1Q92973 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.25■□□□□ 0.83
TNPO1Q92973 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.25■□□□□ 0.83
TNPO1Q92973 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 IFNL4P1-201ENST00000607083 540 ntBASIC20.25■□□□□ 0.83
TNPO1Q92973 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.25■□□□□ 0.83
TNPO1Q92973 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TNPO1Q92973 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TNPO1Q92973 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TNPO1Q92973 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.25■□□□□ 0.83
TNPO1Q92973 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNPO1Q92973 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 HLA-A-202ENST00000376806 1854 ntBASIC20.24■□□□□ 0.83
TNPO1Q92973 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.24■□□□□ 0.83
TNPO1Q92973 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNPO1Q92973 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TNPO1Q92973 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TNPO1Q92973 AC096633.1-201ENST00000422446 749 ntBASIC20.24■□□□□ 0.83
TNPO1Q92973 AL845331.1-201ENST00000424978 1190 ntBASIC20.24■□□□□ 0.83
TNPO1Q92973 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 AL353801.3-201ENST00000609898 542 ntBASIC20.24■□□□□ 0.83
TNPO1Q92973 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.24■□□□□ 0.83
TNPO1Q92973 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.24■□□□□ 0.83
TNPO1Q92973 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.24■□□□□ 0.83
TNPO1Q92973 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.24■□□□□ 0.83
TNPO1Q92973 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TNPO1Q92973 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNPO1Q92973 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.23■□□□□ 0.83
TNPO1Q92973 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms