Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC107Q8WV48 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.77□□□□□ -0.04
CCDC107Q8WV48 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 HYMAI-201ENST00000635591 3347 ntBASIC14.77□□□□□ -0.04
CCDC107Q8WV48 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC107Q8WV48 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 AC068472.1-201ENST00000474589 881 ntBASIC14.77□□□□□ -0.05
CCDC107Q8WV48 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.77□□□□□ -0.05
CCDC107Q8WV48 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 Z83836.1-201ENST00000624605 1642 ntBASIC14.77□□□□□ -0.05
CCDC107Q8WV48 LYSMD4-203ENST00000378904 2122 ntBASIC14.77□□□□□ -0.05
CCDC107Q8WV48 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC107Q8WV48 BX276092.7-203ENST00000637198 1536 ntBASIC14.76□□□□□ -0.05
CCDC107Q8WV48 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 RNF126P1-202ENST00000569893 925 ntBASIC14.76□□□□□ -0.05
CCDC107Q8WV48 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC107Q8WV48 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms