Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC4Q5GLZ8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 COA5-202ENST00000409997 557 ntTSL 4 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 AC004706.3-202ENST00000621574 984 ntBASIC19■□□□□ 0.63
HERC4Q5GLZ8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HERC4Q5GLZ8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19■□□□□ 0.63
HERC4Q5GLZ8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AC004832.2-201ENST00000426397 482 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 RPS2P1-201ENST00000434010 821 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AC244107.1-201ENST00000442033 332 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 Z83851.2-201ENST00000609564 659 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 AC009053.2-201ENST00000563701 2365 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 KRT18P28-201ENST00000453838 1332 ntBASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC4Q5GLZ8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.98■□□□□ 0.63
HERC4Q5GLZ8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms