Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN6P56747 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN6P56747 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN6P56747 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN6P56747 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN6P56747 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN6P56747 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN6P56747 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN6P56747 AL139327.4-201ENST00000612362 153 ntBASIC16.28■□□□□ 0.2
CLDN6P56747 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CLDN6P56747 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN6P56747 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN6P56747 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLDN6P56747 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN6P56747 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN6P56747 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN6P56747 FAM207CP-201ENST00000443486 507 ntBASIC16.27■□□□□ 0.2
CLDN6P56747 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN6P56747 CRB3P1-201ENST00000449338 276 ntBASIC16.27■□□□□ 0.2
CLDN6P56747 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLDN6P56747 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 AC069120.2-201ENST00000524091 540 ntBASIC16.27■□□□□ 0.2
CLDN6P56747 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN6P56747 AL009183.1-201ENST00000603760 355 ntBASIC16.27■□□□□ 0.2
CLDN6P56747 KRT18P55-202ENST00000578578 1546 ntBASIC16.27■□□□□ 0.2
CLDN6P56747 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN6P56747 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN6P56747 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN6P56747 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN6P56747 PKD1P1-201ENST00000458669 6805 ntBASIC16.27■□□□□ 0.19
CLDN6P56747 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN6P56747 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN6P56747 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN6P56747 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN6P56747 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN6P56747 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN6P56747 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN6P56747 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN6P56747 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN6P56747 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN6P56747 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN6P56747 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms