Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 AL162727.3-201ENST00000635661 2787 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 FLJ16779-201ENST00000612722 7638 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
CX3CR1P49238 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
CX3CR1P49238 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CX3CR1P49238 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CX3CR1P49238 PCDHA14-201ENST00000506751 2298 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.98□□□□□ -0.01
CX3CR1P49238 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 ACTG1P4-201ENST00000425123 1122 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.98□□□□□ -0.01
CX3CR1P49238 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.98□□□□□ -0.01
CX3CR1P49238 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 AL591684.3-201ENST00000605187 298 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 AC010331.1-201ENST00000611423 582 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 AC097637.2-201ENST00000624096 1997 ntBASIC14.98□□□□□ -0.01
CX3CR1P49238 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CX3CR1P49238 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CX3CR1P49238 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.98□□□□□ -0.01
CX3CR1P49238 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 RNF216P1-203ENST00000404404 2427 ntBASIC14.97□□□□□ -0.01
CX3CR1P49238 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 AC078925.2-201ENST00000624013 1973 ntBASIC14.97□□□□□ -0.01
CX3CR1P49238 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.97□□□□□ -0.01
CX3CR1P49238 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.97□□□□□ -0.01
CX3CR1P49238 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CX3CR1P49238 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CX3CR1P49238 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.97□□□□□ -0.01
CX3CR1P49238 UBALD1-205ENST00000590891 2641 ntBASIC14.96□□□□□ -0.01
CX3CR1P49238 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CX3CR1P49238 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CX3CR1P49238 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CX3CR1P49238 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms