Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.01□□□□□ -0.17
SCAF4O95104 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.01□□□□□ -0.17
SCAF4O95104 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SCAF4O95104 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.01□□□□□ -0.17
SCAF4O95104 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.01□□□□□ -0.17
SCAF4O95104 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.01□□□□□ -0.17
SCAF4O95104 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.01□□□□□ -0.17
SCAF4O95104 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.01□□□□□ -0.17
SCAF4O95104 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.01□□□□□ -0.17
SCAF4O95104 AC011558.1-201ENST00000623459 338 ntBASIC14.01□□□□□ -0.17
SCAF4O95104 AL031432.5-201ENST00000641059 760 ntBASIC14.01□□□□□ -0.17
SCAF4O95104 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCAF4O95104 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SCAF4O95104 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.01□□□□□ -0.17
SCAF4O95104 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 AC092068.3-201ENST00000587894 2016 ntBASIC14□□□□□ -0.17
SCAF4O95104 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCAF4O95104 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 MIR1224-201ENST00000408193 85 ntBASIC14□□□□□ -0.17
SCAF4O95104 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 DUX4L26-201ENST00000489078 1255 ntBASIC14□□□□□ -0.17
SCAF4O95104 AP002490.2-201ENST00000524791 560 ntBASIC14□□□□□ -0.17
SCAF4O95104 MIR3917-201ENST00000580971 93 ntBASIC14□□□□□ -0.17
SCAF4O95104 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14□□□□□ -0.17
SCAF4O95104 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SCAF4O95104 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SCAF4O95104 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14□□□□□ -0.17
SCAF4O95104 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SCAF4O95104 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCAF4O95104 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SCAF4O95104 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCAF4O95104 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCAF4O95104 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCAF4O95104 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.99□□□□□ -0.17
SCAF4O95104 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCAF4O95104 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
SCAF4O95104 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms