Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 AC008735.5-201ENST00000623544 497 ntBASIC17.01■□□□□ 0.31
CFAP99D6REC4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CFAP99D6REC4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17■□□□□ 0.31
CFAP99D6REC4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17■□□□□ 0.31
CFAP99D6REC4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CFAP99D6REC4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 SLC25A1P3-201ENST00000395415 828 ntBASIC17■□□□□ 0.31
CFAP99D6REC4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17■□□□□ 0.31
CFAP99D6REC4 AL031284.1-201ENST00000419297 478 ntBASIC17■□□□□ 0.31
CFAP99D6REC4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17■□□□□ 0.31
CFAP99D6REC4 AC105339.3-201ENST00000560043 636 ntBASIC17■□□□□ 0.31
CFAP99D6REC4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CFAP99D6REC4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17■□□□□ 0.31
CFAP99D6REC4 PGM5P2-202ENST00000637225 1043 ntBASIC17■□□□□ 0.31
CFAP99D6REC4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17■□□□□ 0.31
CFAP99D6REC4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17■□□□□ 0.31
CFAP99D6REC4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP99D6REC4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 AL118508.1-201ENST00000613502 2345 ntBASIC16.99■□□□□ 0.31
CFAP99D6REC4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
CFAP99D6REC4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.99■□□□□ 0.31
CFAP99D6REC4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 AL162727.3-201ENST00000635661 2787 ntBASIC16.99■□□□□ 0.31
CFAP99D6REC4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP99D6REC4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP99D6REC4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 AL590787.1-201ENST00000568856 1315 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP99D6REC4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP99D6REC4 ELK2BP-201ENST00000415014 1224 ntBASIC16.98■□□□□ 0.31
CFAP99D6REC4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms