Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL353593.2-201ENST00000602529 1483 ntBASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.95■□□□□ 0.14
TCRBV3S1A0A5B6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 TSPY7P-201ENST00000431358 1114 ntBASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 AC141257.4-201ENST00000634557 245 ntBASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 AC136944.6-201ENST00000634818 245 ntBASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV3S1A0A5B6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 MIR662-201ENST00000384847 95 ntBASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 GCSHP5-201ENST00000443090 522 ntBASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 AL139011.1-202ENST00000642063 584 ntBASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV3S1A0A5B6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 AP005117.1-202ENST00000581724 1908 ntBASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV3S1A0A5B6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms