Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 AC011498.5-201ENST00000592027 486 ntBASIC15.23■□□□□ 0.03
COPS3Q9UNS2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COPS3Q9UNS2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 GPR89P-201ENST00000407924 1495 ntBASIC15.22■□□□□ 0.03
COPS3Q9UNS2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 AC090616.6-201ENST00000582640 721 ntBASIC15.22■□□□□ 0.03
COPS3Q9UNS2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COPS3Q9UNS2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.21■□□□□ 0.03
COPS3Q9UNS2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms