Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 AC009947.1-201ENST00000444350 727 ntBASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 RNA5SP415-201ENST00000517246 115 ntBASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.89■□□□□ 0.61
BLOC1S4Q9NUP1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 PMS2P1-201ENST00000431037 1228 ntBASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 AP002490.2-201ENST00000524791 560 ntBASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 MPDU1-223ENST00000582151 728 ntBASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 HLA-A-202ENST00000376806 1854 ntBASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 PCDHA14-201ENST00000506751 2298 ntBASIC18.88■□□□□ 0.61
BLOC1S4Q9NUP1 UBALD1-205ENST00000590891 2641 ntBASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 MRPL20P1-201ENST00000400819 433 ntBASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 AC108751.1-201ENST00000490852 363 ntBASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BLOC1S4Q9NUP1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BLOC1S4Q9NUP1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms