Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 AL845331.1-201ENST00000424978 1190 ntBASIC19.04■□□□□ 0.64
CBX8Q9HC52 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 AL353801.3-201ENST00000609898 542 ntBASIC19.04■□□□□ 0.64
CBX8Q9HC52 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 HYMAI.1-201ENST00000620949 238 ntBASIC19.04■□□□□ 0.64
CBX8Q9HC52 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CBX8Q9HC52 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CBX8Q9HC52 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 RN7SL606P-201ENST00000472779 293 ntBASIC19.03■□□□□ 0.64
CBX8Q9HC52 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.03■□□□□ 0.64
CBX8Q9HC52 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CBX8Q9HC52 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CBX8Q9HC52 LIN28AP1-201ENST00000429574 405 ntBASIC19.02■□□□□ 0.64
CBX8Q9HC52 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CBX8Q9HC52 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.02■□□□□ 0.63
CBX8Q9HC52 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.02■□□□□ 0.63
CBX8Q9HC52 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CBX8Q9HC52 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CBX8Q9HC52 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CBX8Q9HC52 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.02■□□□□ 0.63
CBX8Q9HC52 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.02■□□□□ 0.63
CBX8Q9HC52 AC006538.1-201ENST00000567905 1585 ntBASIC19.02■□□□□ 0.63
CBX8Q9HC52 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX8Q9HC52 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX8Q9HC52 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CBX8Q9HC52 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX8Q9HC52 SPDYE13P-201ENST00000445314 798 ntBASIC19.01■□□□□ 0.63
CBX8Q9HC52 ATP5G1P1-201ENST00000448724 379 ntBASIC19.01■□□□□ 0.63
CBX8Q9HC52 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.01■□□□□ 0.63
CBX8Q9HC52 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX8Q9HC52 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms