Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KIFC3-223ENST00000565684 623 ntTSL 527.06■■□□□ 1.923e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.583e-7■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)24.41■■□□□ 1.58e-9■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-204ENST00000577916 2148 ntTSL 524.15■■□□□ 1.468e-9■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-205ENST00000578352 592 ntTSL 222.86■■□□□ 1.258e-9■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-211ENST00000582811 2039 ntTSL 221.61■■□□□ 1.058e-9■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.038e-9■■□□□ 13.1
XRN2Q9H0D6 LITAF-204ENST00000570798 593 ntTSL 421.24■□□□□ 0.993e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.87■□□□□ 0.933e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.933e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-208ENST00000561524 577 ntTSL 419.92■□□□□ 0.783e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-228ENST00000566975 580 ntTSL 419.92■□□□□ 0.783e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-212ENST00000573332 773 ntTSL 419.87■□□□□ 0.773e-7■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-210ENST00000582770 1654 ntTSL 219.29■□□□□ 0.688e-9■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-208ENST00000581800 627 ntTSL 419.25■□□□□ 0.678e-9■■□□□ 13.1
XRN2Q9H0D6 KIFC3-232ENST00000569112 564 ntTSL 419.2■□□□□ 0.663e-7■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.05■□□□□ 0.648e-9■■□□□ 13.1
XRN2Q9H0D6 KIFC3-210ENST00000562503 737 ntTSL 418.89■□□□□ 0.613e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.77■□□□□ 0.63e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.77■□□□□ 0.63e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-226ENST00000566648 651 ntTSL 318.25■□□□□ 0.513e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.463e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-208ENST00000571627 579 ntTSL 417.22■□□□□ 0.353e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-230ENST00000567204 516 ntTSL 416.58■□□□□ 0.243e-7■■□□□ 13.1
XRN2Q9H0D6 ISYNA1-203ENST00000577820 1466 ntTSL 516.36■□□□□ 0.218e-9■■□□□ 13.1
XRN2Q9H0D6 KIFC3-212ENST00000562984 551 ntTSL 416.33■□□□□ 0.23e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.133e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-233ENST00000569222 443 ntTSL 315.68■□□□□ 0.13e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-219ENST00000576334 556 ntTSL 414.24□□□□□ -0.133e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-234ENST00000569619 698 ntTSL 314.13□□□□□ -0.153e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-222ENST00000565481 788 ntTSL 514□□□□□ -0.173e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-206ENST00000571277 587 ntTSL 413.72□□□□□ -0.213e-7■■□□□ 13.1
XRN2Q9H0D6 PIP4K2B-203ENST00000617781 927 ntTSL 213.45□□□□□ -0.263e-16■■□□□ 13.1
XRN2Q9H0D6 KIFC3-220ENST00000565351 297 ntTSL 1 (best)13.27□□□□□ -0.293e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.18□□□□□ -0.33e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-216ENST00000574848 554 ntTSL 412.61□□□□□ -0.393e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.483e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-207ENST00000571459 677 ntTSL 5 BASIC11.78□□□□□ -0.523e-7■■□□□ 13.1
XRN2Q9H0D6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.276e-7■■□□□ 13.1
XRN2Q9H0D6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 16e-7■■□□□ 13.1
XRN2Q9H0D6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.926e-7■■□□□ 13.1
XRN2Q9H0D6 MAGI2-216ENST00000628997 641 ntTSL 316.44■□□□□ 0.226e-7■■□□□ 13.1
XRN2Q9H0D6 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC10.46□□□□□ -0.736e-7■■□□□ 13.1
XRN2Q9H0D6 SLC26A11-205ENST00000571176 845 ntTSL 318.7■□□□□ 0.584e-6■■□□□ 13.1
XRN2Q9H0D6 PRMT1-216ENST00000530361 866 ntTSL 320.98■□□□□ 0.952e-6■■□□□ 13.1
XRN2Q9H0D6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.842e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.582e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.32e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.01■□□□□ 0.472e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-210ENST00000598325 1438 ntTSL 517.18■□□□□ 0.342e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.292e-6■■□□□ 13
XRN2Q9H0D6 PTOV1-218ENST00000601612 1480 ntTSL 215.48■□□□□ 0.072e-6■■□□□ 13
XRN2Q9H0D6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.012e-6■■□□□ 13
XRN2Q9H0D6 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.57□□□□□ -0.082e-6■■□□□ 13
XRN2Q9H0D6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.32□□□□□ -0.122e-6■■□□□ 13
XRN2Q9H0D6 MED15-211ENST00000433831 3267 ntTSL 513.72□□□□□ -0.212e-6■■□□□ 13
XRN2Q9H0D6 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.332e-6■■□□□ 13
XRN2Q9H0D6 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)12.54□□□□□ -0.44e-11■■□□□ 13
XRN2Q9H0D6 MED15-230ENST00000492381 3619 ntTSL 210.37□□□□□ -0.752e-6■■□□□ 13
XRN2Q9H0D6 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.08□□□□□ -1.124e-11■■□□□ 13
XRN2Q9H0D6 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)21.74■■□□□ 1.078e-8■■□□□ 13
XRN2Q9H0D6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.88e-8■■□□□ 13
XRN2Q9H0D6 OSBPL2-208ENST00000618509 582 ntTSL 417.24■□□□□ 0.352e-8■■□□□ 13
XRN2Q9H0D6 GLYR1-208ENST00000588297 580 ntTSL 319.84■□□□□ 0.771e-7■■□□□ 13
XRN2Q9H0D6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.513e-6■■□□□ 13
XRN2Q9H0D6 STK11-206ENST00000586358 770 ntTSL 517.59■□□□□ 0.413e-6■■□□□ 13
XRN2Q9H0D6 STK11-204ENST00000585851 505 ntTSL 316.55■□□□□ 0.243e-6■■□□□ 13
XRN2Q9H0D6 STK11-207ENST00000589152 3365 ntTSL 214.35□□□□□ -0.113e-6■■□□□ 13
XRN2Q9H0D6 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-7■■□□□ 13
XRN2Q9H0D6 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.541e-7■■□□□ 13
XRN2Q9H0D6 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC11.43□□□□□ -0.581e-7■■□□□ 13
XRN2Q9H0D6 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)9.87□□□□□ -0.831e-7■■□□□ 13
XRN2Q9H0D6 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -13e-6■■□□□ 13
XRN2Q9H0D6 TMEM74B-203ENST00000481747 582 ntTSL 233.16■■■□□ 2.92e-6■■□□□ 13
XRN2Q9H0D6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.952e-6■■□□□ 13
XRN2Q9H0D6 MGRN1-213ENST00000590790 994 ntTSL 517.38■□□□□ 0.375e-6■■□□□ 13
XRN2Q9H0D6 MGRN1-212ENST00000590457 552 ntTSL 313.15□□□□□ -0.35e-6■■□□□ 13
XRN2Q9H0D6 MGRN1-207ENST00000587145 577 ntTSL 413.15□□□□□ -0.35e-6■■□□□ 13
XRN2Q9H0D6 MGRN1-217ENST00000593224 498 ntTSL 512.5□□□□□ -0.415e-6■■□□□ 13
XRN2Q9H0D6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.52□□□□□ -1.216e-81■■□□□ 13
XRN2Q9H0D6 NARF-210ENST00000578082 841 ntTSL 417.3■□□□□ 0.361e-6■■□□□ 13
XRN2Q9H0D6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.87■■■□□ 2.535e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-220ENST00000532278 506 ntTSL 427.93■■■□□ 2.065e-6■■□□□ 13
XRN2Q9H0D6 MIB2-212ENST00000486072 568 ntTSL 325.85■■□□□ 1.735e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-210ENST00000528073 986 ntTSL 323.99■■□□□ 1.435e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-204ENST00000525087 937 ntTSL 523.85■■□□□ 1.415e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-217ENST00000532758 1079 ntTSL 323.85■■□□□ 1.415e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-214ENST00000530633 835 ntTSL 323.83■■□□□ 1.415e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-207ENST00000526341 557 ntTSL 523.8■■□□□ 1.45e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-211ENST00000529503 878 ntTSL 523.8■■□□□ 1.45e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-211ENST00000484104 725 ntTSL 223.77■■□□□ 1.45e-6■■□□□ 13
XRN2Q9H0D6 GPAA1-213ENST00000530258 535 ntTSL 423.73■■□□□ 1.395e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-210ENST00000483227 886 ntTSL 1 (best)23.41■■□□□ 1.345e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-214ENST00000493924 1573 ntTSL 523.3■■□□□ 1.325e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-203ENST00000381117 798 ntTSL 1 (best)23.09■■□□□ 1.295e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-205ENST00000437313 734 ntTSL 523.09■■□□□ 1.295e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-209ENST00000479508 741 ntTSL 223.09■■□□□ 1.295e-6■■□□□ 13
XRN2Q9H0D6 SLC43A3-217ENST00000530005 1434 ntTSL 1 (best)22.81■■□□□ 1.245e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-216ENST00000498313 988 ntTSL 522.15■■□□□ 1.145e-6■■□□□ 13
XRN2Q9H0D6 TSPAN32-215ENST00000493948 641 ntTSL 322■■□□□ 1.115e-6■■□□□ 13
Retrieved 100 of 21,068 protein–RNA pairs in 151.8 ms