Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 GPAT2P1-201ENST00000444924 1672 ntBASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC008687.5-201ENST00000593746 558 ntBASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC008622.2-201ENST00000617006 1229 ntBASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NDUFAF3Q9BU61 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 AC009102.3-201ENST00000623118 1491 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 KRT8P50-201ENST00000562022 1438 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 AC009947.2-201ENST00000444014 672 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFAF3Q9BU61 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms