Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ACTL9-202ENST00000612068 1252 ntBASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AC090340.1-201ENST00000620778 4980 ntBASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AC131009.4-201ENST00000624048 1740 ntBASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 AL603756.1-201ENST00000606511 2163 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 AL590627.1-203ENST00000421194 1026 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 PMS2P1-201ENST00000431037 1228 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 HCG4B-203ENST00000450128 991 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 RPL13AP23-201ENST00000480739 586 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 MIR4751-201ENST00000578027 74 ntBASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTHRC1Q96CG8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AC104109.2-201ENST00000602919 1418 ntBASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 CRYGEP-201ENST00000412192 528 ntBASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 IGLL3P-201ENST00000412472 434 ntBASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 CXCL1P1-201ENST00000502804 216 ntBASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 SNX33P1-201ENST00000592116 1762 ntBASIC15.72■□□□□ 0.11
CTHRC1Q96CG8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
CTHRC1Q96CG8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTHRC1Q96CG8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTHRC1Q96CG8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.71■□□□□ 0.11
CTHRC1Q96CG8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms