Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 MRPL20P1-201ENST00000400819 433 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 AC098831.1-202ENST00000438821 336 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 AC108073.2-201ENST00000464002 357 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 AC107918.2-201ENST00000530817 355 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 FLJ38576-201ENST00000623820 2459 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 AC129492.6-201ENST00000611383 1305 ntBASIC14.96□□□□□ -0.01
TMEM54Q969K7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 AC006277.1-201ENST00000624348 1610 ntBASIC14.96□□□□□ -0.01
TMEM54Q969K7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 AC091167.2-201ENST00000579581 588 ntBASIC14.96□□□□□ -0.01
TMEM54Q969K7 MPDU1-223ENST00000582151 728 ntBASIC14.96□□□□□ -0.01
TMEM54Q969K7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 AC004790.2-201ENST00000623588 572 ntBASIC14.96□□□□□ -0.01
TMEM54Q969K7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM54Q969K7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM54Q969K7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.96□□□□□ -0.02
TMEM54Q969K7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.96□□□□□ -0.02
TMEM54Q969K7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.96□□□□□ -0.02
TMEM54Q969K7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.96□□□□□ -0.02
TMEM54Q969K7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.96□□□□□ -0.02
TMEM54Q969K7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM54Q969K7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TMEM54Q969K7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
TMEM54Q969K7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM54Q969K7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms