Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AC122714.2-201ENST00000502787 707 ntBASIC15.42■□□□□ 0.06
APH1BQ8WW43 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AC111152.3-201ENST00000569699 673 ntBASIC15.42■□□□□ 0.06
APH1BQ8WW43 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 AL138966.2-201ENST00000621997 464 ntBASIC15.42■□□□□ 0.06
APH1BQ8WW43 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
APH1BQ8WW43 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1BQ8WW43 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 AC009336.1-201ENST00000608941 1553 ntBASIC15.41■□□□□ 0.06
APH1BQ8WW43 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 LINC00895-201ENST00000629028 1637 ntBASIC15.41■□□□□ 0.06
APH1BQ8WW43 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1BQ8WW43 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
APH1BQ8WW43 AL353593.2-201ENST00000602529 1483 ntBASIC15.4■□□□□ 0.06
APH1BQ8WW43 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
APH1BQ8WW43 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1BQ8WW43 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1BQ8WW43 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1BQ8WW43 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1BQ8WW43 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
APH1BQ8WW43 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
APH1BQ8WW43 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1BQ8WW43 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms