Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 VENTXP5-201ENST00000523979 775 ntBASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AC011467.2-201ENST00000598425 242 ntBASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AL592071.1-201ENST00000611956 408 ntBASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01561Q8N1V8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 PCDHB17P-201ENST00000539533 2393 ntBASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 KRT18P38-201ENST00000449496 1282 ntBASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC005336.2-201ENST00000593183 939 ntBASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 AC124864.1-201ENST00000623408 392 ntBASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01561Q8N1V8 NFIC-211ENST00000641145 8399 ntBASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 AL391256.1-201ENST00000443260 1855 ntBASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms