Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AL121772.3-201ENST00000610840 674 ntBASIC19.18■□□□□ 0.66
SHC4Q6S5L8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 MTDHP4-201ENST00000600287 670 ntBASIC19.17■□□□□ 0.66
SHC4Q6S5L8 AC008608.2-201ENST00000606089 416 ntBASIC19.17■□□□□ 0.66
SHC4Q6S5L8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 REXO1L6P-202ENST00000619970 1078 ntBASIC19.17■□□□□ 0.66
SHC4Q6S5L8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 AC006277.1-201ENST00000624348 1610 ntBASIC19.17■□□□□ 0.66
SHC4Q6S5L8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC4Q6S5L8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 AC006538.1-201ENST00000567905 1585 ntBASIC19.16■□□□□ 0.66
SHC4Q6S5L8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 AC013467.2-201ENST00000605472 835 ntBASIC19.16■□□□□ 0.66
SHC4Q6S5L8 AC004706.3-202ENST00000621574 984 ntBASIC19.16■□□□□ 0.66
SHC4Q6S5L8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms