Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 AC006449.5-201ENST00000610658 2098 ntBASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
ATPAF1Q5TC12 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 BX276092.7-203ENST00000637198 1536 ntBASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 AP000867.3-201ENST00000524675 377 ntBASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATPAF1Q5TC12 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NSUN5P1-202ENST00000421140 1535 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NSUN5P2-203ENST00000457352 1529 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 HCG4P8-203ENST00000443049 980 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NUS1P1-201ENST00000446295 882 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 AC122714.2-201ENST00000502787 707 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 AC074051.2-201ENST00000565115 352 ntBASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms