Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.21■□□□□ 0.34
CDH17Q12864 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.21■□□□□ 0.34
CDH17Q12864 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDH17Q12864 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH17Q12864 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH17Q12864 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
CDH17Q12864 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 AKR1C7P-201ENST00000305623 895 ntBASIC17.2■□□□□ 0.34
CDH17Q12864 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH17Q12864 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH17Q12864 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDH17Q12864 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH17Q12864 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH17Q12864 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH17Q12864 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH17Q12864 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDH17Q12864 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH17Q12864 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH17Q12864 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH17Q12864 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH17Q12864 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.19■□□□□ 0.34
CDH17Q12864 CLEC4GP1-201ENST00000596555 870 ntBASIC17.19■□□□□ 0.34
CDH17Q12864 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CDH17Q12864 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
CDH17Q12864 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
CDH17Q12864 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDH17Q12864 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH17Q12864 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH17Q12864 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH17Q12864 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CDH17Q12864 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH17Q12864 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH17Q12864 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH17Q12864 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH17Q12864 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH17Q12864 AF238378.1-201ENST00000526806 358 ntBASIC17.18■□□□□ 0.34
CDH17Q12864 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH17Q12864 AC004706.3-202ENST00000621574 984 ntBASIC17.18■□□□□ 0.34
CDH17Q12864 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms