Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PCDHB17P-201ENST00000539533 2393 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 HLA-A-202ENST00000376806 1854 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 AL671277.2-201ENST00000458060 996 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.72■□□□□ 0.11
SMIM11AP58511 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.72■□□□□ 0.11
SMIM11AP58511 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 AC011498.5-201ENST00000592027 486 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AC011467.2-201ENST00000598425 242 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AC083849.1-201ENST00000615227 514 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.72■□□□□ 0.11
SMIM11AP58511 AD001527.2-201ENST00000622994 785 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AC092171.3-201ENST00000610122 2651 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 AC132938.5-201ENST00000624980 1813 ntBASIC15.72■□□□□ 0.11
SMIM11AP58511 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SMIM11AP58511 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMIM11AP58511 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 AL391005.1-201ENST00000623953 2435 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 AL845331.1-201ENST00000424978 1190 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.71■□□□□ 0.11
SMIM11AP58511 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 KRT8P26-201ENST00000534154 1276 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.71■□□□□ 0.11
SMIM11AP58511 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.71■□□□□ 0.11
SMIM11AP58511 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 AC006011.2-201ENST00000621313 1158 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 AC073592.5-201ENST00000624854 528 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 PCDH8P1-201ENST00000428983 2773 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SMIM11AP58511 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SMIM11AP58511 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM11AP58511 AL391256.1-201ENST00000443260 1855 ntBASIC15.71■□□□□ 0.11
SMIM11AP58511 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
SMIM11AP58511 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SMIM11AP58511 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms