Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCK1P35558 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 AC097637.2-201ENST00000624096 1997 ntBASIC17.97■□□□□ 0.47
PCK1P35558 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.97■□□□□ 0.47
PCK1P35558 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.97■□□□□ 0.47
PCK1P35558 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
PCK1P35558 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.97■□□□□ 0.47
PCK1P35558 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.97■□□□□ 0.47
PCK1P35558 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCK1P35558 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCK1P35558 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.97■□□□□ 0.47
PCK1P35558 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.96■□□□□ 0.47
PCK1P35558 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.96■□□□□ 0.47
PCK1P35558 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PCK1P35558 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.96■□□□□ 0.47
PCK1P35558 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.96■□□□□ 0.47
PCK1P35558 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.96■□□□□ 0.47
PCK1P35558 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.96■□□□□ 0.47
PCK1P35558 AL732292.2-201ENST00000609649 430 ntBASIC17.96■□□□□ 0.47
PCK1P35558 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 FRMD8P1-201ENST00000440433 1524 ntBASIC17.96■□□□□ 0.47
PCK1P35558 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.96■□□□□ 0.47
PCK1P35558 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.96■□□□□ 0.47
PCK1P35558 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCK1P35558 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.96■□□□□ 0.47
PCK1P35558 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
PCK1P35558 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCK1P35558 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCK1P35558 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.96■□□□□ 0.46
PCK1P35558 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.95■□□□□ 0.46
PCK1P35558 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCK1P35558 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCK1P35558 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 LINC00982-205ENST00000420957 435 ntBASIC17.95■□□□□ 0.46
PCK1P35558 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCK1P35558 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.95■□□□□ 0.46
PCK1P35558 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.95■□□□□ 0.46
PCK1P35558 AC091304.2-201ENST00000564639 760 ntBASIC17.95■□□□□ 0.46
PCK1P35558 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.95■□□□□ 0.46
PCK1P35558 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.95■□□□□ 0.46
PCK1P35558 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.95■□□□□ 0.46
PCK1P35558 AL139288.1-201ENST00000623748 933 ntBASIC17.95■□□□□ 0.46
PCK1P35558 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCK1P35558 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.95■□□□□ 0.46
PCK1P35558 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms