Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 AL450487.1-201ENST00000426799 995 ntBASIC18.83■□□□□ 0.6
TRIM21P19474 AC124947.2-201ENST00000547118 1133 ntBASIC18.83■□□□□ 0.6
TRIM21P19474 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM21P19474 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRIM21P19474 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM21P19474 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM21P19474 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM21P19474 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM21P19474 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.6
TRIM21P19474 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM21P19474 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM21P19474 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 INTS4P1-201ENST00000438455 1935 ntBASIC18.82■□□□□ 0.6
TRIM21P19474 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM21P19474 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 EGFEM1P-202ENST00000431685 1563 ntBASIC18.82■□□□□ 0.6
TRIM21P19474 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM21P19474 RCN1P2-201ENST00000398357 915 ntBASIC18.82■□□□□ 0.6
TRIM21P19474 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM21P19474 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM21P19474 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM21P19474 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM21P19474 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM21P19474 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM21P19474 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
TRIM21P19474 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM21P19474 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 FER1L4-210ENST00000615531 5998 ntBASIC18.82■□□□□ 0.6
TRIM21P19474 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM21P19474 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM21P19474 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM21P19474 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM21P19474 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 AC078925.2-201ENST00000624013 1973 ntBASIC18.81■□□□□ 0.6
TRIM21P19474 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM21P19474 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM21P19474 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM21P19474 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.81■□□□□ 0.6
TRIM21P19474 KRT126P-201ENST00000549467 1181 ntBASIC18.81■□□□□ 0.6
TRIM21P19474 STK25P1-201ENST00000585406 838 ntBASIC18.81■□□□□ 0.6
TRIM21P19474 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM21P19474 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM21P19474 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM21P19474 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM21P19474 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM21P19474 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM21P19474 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM21P19474 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM21P19474 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM21P19474 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM21P19474 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM21P19474 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms