Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 COL6A4P2-202ENST00000504443 2753 ntBASIC15.21■□□□□ 0.03
PFDN1O60925 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 ALOX12P2-203ENST00000570921 1945 ntBASIC15.21■□□□□ 0.02
PFDN1O60925 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 AL139385.1-201ENST00000611744 3272 ntBASIC15.21■□□□□ 0.02
PFDN1O60925 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PFDN1O60925 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.21■□□□□ 0.02
PFDN1O60925 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
PFDN1O60925 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PFDN1O60925 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PFDN1O60925 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 AC006486.2-201ENST00000624246 2199 ntBASIC15.2■□□□□ 0.02
PFDN1O60925 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 AC026396.1-201ENST00000419388 421 ntBASIC15.2■□□□□ 0.02
PFDN1O60925 TSPY23P-201ENST00000440136 739 ntBASIC15.2■□□□□ 0.02
PFDN1O60925 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 AC008764.7-201ENST00000593779 1081 ntBASIC15.2■□□□□ 0.02
PFDN1O60925 AC104187.1-201ENST00000607510 612 ntBASIC15.2■□□□□ 0.02
PFDN1O60925 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
PFDN1O60925 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PFDN1O60925 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PFDN1O60925 AC092053.1-201ENST00000605787 1936 ntBASIC15.19■□□□□ 0.02
PFDN1O60925 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
PFDN1O60925 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.19■□□□□ 0.02
PFDN1O60925 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 AC012414.1-201ENST00000556676 535 ntBASIC15.19■□□□□ 0.02
PFDN1O60925 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.19■□□□□ 0.02
PFDN1O60925 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PFDN1O60925 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.19■□□□□ 0.02
PFDN1O60925 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 AP005117.1-202ENST00000581724 1908 ntBASIC15.19■□□□□ 0.02
PFDN1O60925 CICP8-201ENST00000455800 2813 ntBASIC15.19■□□□□ 0.02
PFDN1O60925 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms