Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RIPK2O43353 AC132938.5-201ENST00000624980 1813 ntBASIC17.33■□□□□ 0.36
RIPK2O43353 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 LIN28AP1-201ENST00000429574 405 ntBASIC17.32■□□□□ 0.36
RIPK2O43353 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.32■□□□□ 0.36
RIPK2O43353 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.32■□□□□ 0.36
RIPK2O43353 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 AC139887.4-201ENST00000607877 719 ntBASIC17.32■□□□□ 0.36
RIPK2O43353 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RIPK2O43353 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RIPK2O43353 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RIPK2O43353 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RIPK2O43353 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
RIPK2O43353 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RIPK2O43353 ATP5G1P1-201ENST00000448724 379 ntBASIC17.31■□□□□ 0.36
RIPK2O43353 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.31■□□□□ 0.36
RIPK2O43353 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 RN7SL606P-201ENST00000472779 293 ntBASIC17.31■□□□□ 0.36
RIPK2O43353 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RIPK2O43353 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 HYMAI.1-201ENST00000620949 238 ntBASIC17.31■□□□□ 0.36
RIPK2O43353 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RIPK2O43353 LINC00895-201ENST00000629028 1637 ntBASIC17.31■□□□□ 0.36
RIPK2O43353 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RIPK2O43353 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.31■□□□□ 0.36
RIPK2O43353 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
RIPK2O43353 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.3■□□□□ 0.36
RIPK2O43353 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms