Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 MFSD11-216ENST00000590393 1141 ntBASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 NTF6A-201ENST00000591175 560 ntBASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CYP21A1P-202ENST00000354927 1481 ntBASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CHKB-CPT1BH3BT56 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AL023775.1-201ENST00000454907 1746 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 BX842568.3-201ENST00000418104 571 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SLC7A5P2-201ENST00000553010 536 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L2-201ENST00000561772 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L6-201ENST00000626483 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L1-201ENST00000627662 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L8-201ENST00000629013 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L3-201ENST00000630187 1275 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms