Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 VN2R19P-201ENST00000442399 1052 ntBASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHA4Q9UN74 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 PRORSD1P-202ENST00000563365 2154 ntBASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 AC106886.4-201ENST00000623557 2502 ntBASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHA4Q9UN74 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 CRYGEP-201ENST00000412192 528 ntBASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHA4Q9UN74 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 AL645728.1-201ENST00000366221 2101 ntBASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 IGLL3P-201ENST00000412472 434 ntBASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms