Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR9Q9NR96 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR9Q9NR96 LYSMD4-203ENST00000378904 2122 ntBASIC18.01■□□□□ 0.47
TLR9Q9NR96 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.01■□□□□ 0.47
TLR9Q9NR96 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
TLR9Q9NR96 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR9Q9NR96 AL353732.1-201ENST00000569618 1459 ntBASIC18.01■□□□□ 0.47
TLR9Q9NR96 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR9Q9NR96 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
TLR9Q9NR96 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TLR9Q9NR96 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TLR9Q9NR96 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 LINC00304-203ENST00000565008 1864 ntBASIC17.99■□□□□ 0.47
TLR9Q9NR96 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 HCG4-201ENST00000418983 998 ntBASIC17.99■□□□□ 0.47
TLR9Q9NR96 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.99■□□□□ 0.47
TLR9Q9NR96 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 ALG1L8P-201ENST00000533887 760 ntBASIC17.99■□□□□ 0.47
TLR9Q9NR96 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 AC008267.7-201ENST00000624570 1194 ntBASIC17.99■□□□□ 0.47
TLR9Q9NR96 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TLR9Q9NR96 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TLR9Q9NR96 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.98■□□□□ 0.47
TLR9Q9NR96 AC097493.3-201ENST00000509725 367 ntBASIC17.98■□□□□ 0.47
TLR9Q9NR96 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms