Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 MIR1238-201ENST00000408483 83 ntBASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC005104.2-201ENST00000427818 678 ntBASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AL512604.3-201ENST00000569583 964 ntBASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AC092053.1-201ENST00000605787 1936 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AC093525.9-201ENST00000624961 1746 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 TSPY14P-201ENST00000303979 915 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AC128688.1-201ENST00000487626 519 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 NEK4P2-201ENST00000580004 1012 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 AL157888.1-201ENST00000631930 593 ntBASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SND1-IT1Q9HBX3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms