Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SART3-203ENST00000546611 1184 ntBASIC16.68■□□□□ 0.26
ATL1Q8WXF7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATL1Q8WXF7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 AF238378.1-201ENST00000526806 358 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 AC064862.7-201ENST00000604520 867 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 AL139424.1-201ENST00000607572 797 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 TUBB8P12-201ENST00000308911 1335 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 TUBB7P-202ENST00000428444 1305 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 TUBB8P7-204ENST00000567960 1332 ntBASIC16.67■□□□□ 0.26
ATL1Q8WXF7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATL1Q8WXF7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 AL590787.1-201ENST00000568856 1315 ntBASIC16.66■□□□□ 0.26
ATL1Q8WXF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL1Q8WXF7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ATL1Q8WXF7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms