Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 MESTP1-201ENST00000404287 994 ntBASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AC133681.1-201ENST00000465482 601 ntBASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SMIM11BQ8TCY0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AP003097.1-201ENST00000530657 1135 ntBASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM11BQ8TCY0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms