Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 AC026150.2-201ENST00000564693 1156 ntBASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHROOM1Q2M3G4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 AC131009.4-201ENST00000624048 1740 ntBASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHROOM1Q2M3G4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 MIR661-201ENST00000384842 89 ntBASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AC015911.4-201ENST00000588022 1070 ntBASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AP001059.3-201ENST00000619053 235 ntBASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AL161645.1-201ENST00000622716 1255 ntBASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHROOM1Q2M3G4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms