Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SMIM11AP58511 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.75■□□□□ 0.11
SMIM11AP58511 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM11AP58511 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SMIM11AP58511 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM11AP58511 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM11AP58511 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 FLJ16779-201ENST00000612722 7638 ntBASIC15.75■□□□□ 0.11
SMIM11AP58511 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMIM11AP58511 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SMIM11AP58511 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM11AP58511 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM11AP58511 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 AL513523.2-202ENST00000427283 2040 ntBASIC15.74■□□□□ 0.11
SMIM11AP58511 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMIM11AP58511 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.74■□□□□ 0.11
SMIM11AP58511 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMIM11AP58511 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMIM11AP58511 LINC01238-205ENST00000567549 1107 ntBASIC15.74■□□□□ 0.11
SMIM11AP58511 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.74■□□□□ 0.11
SMIM11AP58511 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMIM11AP58511 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM11AP58511 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM11AP58511 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM11AP58511 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM11AP58511 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMIM11AP58511 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SMIM11AP58511 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM11AP58511 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.73■□□□□ 0.11
SMIM11AP58511 SPDYE13P-201ENST00000445314 798 ntBASIC15.73■□□□□ 0.11
SMIM11AP58511 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.73■□□□□ 0.11
SMIM11AP58511 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.73■□□□□ 0.11
SMIM11AP58511 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM11AP58511 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM11AP58511 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM11AP58511 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 AL021920.2-201ENST00000624828 1351 ntBASIC15.73■□□□□ 0.11
SMIM11AP58511 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM11AP58511 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM11AP58511 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM11AP58511 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM11AP58511 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms