Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
EPHB3P54753 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
EPHB3P54753 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EPHB3P54753 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.73■□□□□ 0.43
EPHB3P54753 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 AC109322.1-201ENST00000524499 1264 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 AC109635.5-201ENST00000533593 962 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 AC087641.1-201ENST00000557561 1021 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 AC243562.1-201ENST00000560672 389 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 AC009093.7-201ENST00000623853 1223 ntBASIC17.73■□□□□ 0.43
EPHB3P54753 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.73■□□□□ 0.43
EPHB3P54753 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.73■□□□□ 0.43
EPHB3P54753 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EPHB3P54753 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
EPHB3P54753 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHB3P54753 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHB3P54753 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EPHB3P54753 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EPHB3P54753 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EPHB3P54753 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHB3P54753 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EPHB3P54753 MIR770-201ENST00000390219 98 ntBASIC17.72■□□□□ 0.43
EPHB3P54753 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.72■□□□□ 0.43
EPHB3P54753 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHB3P54753 AC092474.2-201ENST00000424288 719 ntBASIC17.72■□□□□ 0.43
EPHB3P54753 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHB3P54753 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 AC093520.2-201ENST00000561830 333 ntBASIC17.72■□□□□ 0.43
EPHB3P54753 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHB3P54753 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHB3P54753 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
EPHB3P54753 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB3P54753 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB3P54753 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB3P54753 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB3P54753 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB3P54753 KRT18P32-201ENST00000424695 1287 ntBASIC17.71■□□□□ 0.43
EPHB3P54753 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 IGHV3-62-201ENST00000520057 340 ntBASIC17.71■□□□□ 0.43
EPHB3P54753 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
EPHB3P54753 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB3P54753 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.71■□□□□ 0.43
EPHB3P54753 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.71■□□□□ 0.43
EPHB3P54753 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB3P54753 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
EPHB3P54753 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB3P54753 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EPHB3P54753 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB3P54753 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.71■□□□□ 0.42
EPHB3P54753 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB3P54753 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB3P54753 SLC22A20-204ENST00000530038 1673 ntBASIC17.71■□□□□ 0.42
EPHB3P54753 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
EPHB3P54753 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms