Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16■□□□□ 0.15
CCL4P13236 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16■□□□□ 0.15
CCL4P13236 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16■□□□□ 0.15
CCL4P13236 BAD-207ENST00000544785 525 ntTSL 3 BASIC16■□□□□ 0.15
CCL4P13236 AC087641.1-201ENST00000557561 1021 ntBASIC16■□□□□ 0.15
CCL4P13236 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16■□□□□ 0.15
CCL4P13236 AC091167.2-201ENST00000579581 588 ntBASIC16■□□□□ 0.15
CCL4P13236 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16■□□□□ 0.15
CCL4P13236 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16■□□□□ 0.15
CCL4P13236 AC027307.2-201ENST00000591252 911 ntBASIC16■□□□□ 0.15
CCL4P13236 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCL4P13236 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16■□□□□ 0.15
CCL4P13236 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCL4P13236 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16■□□□□ 0.15
CCL4P13236 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16■□□□□ 0.15
CCL4P13236 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16■□□□□ 0.15
CCL4P13236 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCL4P13236 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.99■□□□□ 0.15
CCL4P13236 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL4P13236 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 AC236430.1-201ENST00000402231 743 ntBASIC15.99■□□□□ 0.15
CCL4P13236 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 UGT1A2P-201ENST00000454886 866 ntBASIC15.99■□□□□ 0.15
CCL4P13236 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 AC140878.1-201ENST00000565277 250 ntBASIC15.99■□□□□ 0.15
CCL4P13236 AP000842.3-202ENST00000569238 1080 ntBASIC15.99■□□□□ 0.15
CCL4P13236 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.99■□□□□ 0.15
CCL4P13236 AC239800.4-201ENST00000603712 296 ntBASIC15.99■□□□□ 0.15
CCL4P13236 MIR6080-201ENST00000617359 66 ntBASIC15.99■□□□□ 0.15
CCL4P13236 AC008267.7-201ENST00000624570 1194 ntBASIC15.99■□□□□ 0.15
CCL4P13236 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CCL4P13236 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CCL4P13236 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL4P13236 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL4P13236 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL4P13236 AC016027.1-202ENST00000607927 1699 ntBASIC15.99■□□□□ 0.15
CCL4P13236 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.98■□□□□ 0.15
CCL4P13236 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 AL390961.4-201ENST00000623958 2535 ntBASIC15.98■□□□□ 0.15
CCL4P13236 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.98■□□□□ 0.15
CCL4P13236 SPDYE7P-202ENST00000420373 878 ntBASIC15.98■□□□□ 0.15
CCL4P13236 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.98■□□□□ 0.15
CCL4P13236 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.98■□□□□ 0.15
CCL4P13236 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 IGHV3-42-201ENST00000520410 361 ntBASIC15.98■□□□□ 0.15
CCL4P13236 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.98■□□□□ 0.15
CCL4P13236 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.98■□□□□ 0.15
CCL4P13236 ALG1L8P-201ENST00000533887 760 ntBASIC15.98■□□□□ 0.15
CCL4P13236 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.98■□□□□ 0.15
CCL4P13236 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
CCL4P13236 MPDU1-223ENST00000582151 728 ntBASIC15.98■□□□□ 0.15
CCL4P13236 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.98■□□□□ 0.15
CCL4P13236 AL390754.1-201ENST00000619088 582 ntBASIC15.98■□□□□ 0.15
CCL4P13236 AC131009.4-201ENST00000624048 1740 ntBASIC15.98■□□□□ 0.15
CCL4P13236 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms