Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.19■□□□□ 0.18
UPK1AO00322 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.19■□□□□ 0.18
UPK1AO00322 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 AP001269.4-201ENST00000609611 512 ntBASIC16.19■□□□□ 0.18
UPK1AO00322 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
UPK1AO00322 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 AL513523.2-202ENST00000427283 2040 ntBASIC16.19■□□□□ 0.18
UPK1AO00322 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1AO00322 SIGLEC16-201ENST00000599858 1437 ntBASIC16.19■□□□□ 0.18
UPK1AO00322 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UPK1AO00322 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.18■□□□□ 0.18
UPK1AO00322 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 TSPY19P-201ENST00000418461 509 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 TSPY18P-201ENST00000441642 509 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 SIGLEC30P-201ENST00000455569 941 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 KRT18P31-201ENST00000506277 1292 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.18■□□□□ 0.18
UPK1AO00322 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.18■□□□□ 0.18
UPK1AO00322 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.18■□□□□ 0.18
UPK1AO00322 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 AL732292.2-201ENST00000609649 430 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 AL121772.3-201ENST00000610840 674 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 AC073592.4-201ENST00000623827 446 ntBASIC16.18■□□□□ 0.18
UPK1AO00322 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1AO00322 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
UPK1AO00322 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1AO00322 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1AO00322 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
UPK1AO00322 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1AO00322 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 AC079776.2-201ENST00000641154 1609 ntBASIC16.17■□□□□ 0.18
UPK1AO00322 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UPK1AO00322 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1AO00322 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms